|
Omics Data Collection & Preparation
|
Explore available omics databases before you design your analysis workflow
Thoroughly explore the supplamental materials of research study papers.
Make sure to install any necessry software in advance.
Always include informative documents for your data.
Carefully name and store your raw and calculated data files.
|
|
DE Analysis with Exact Tests
|
The BiocManager is is a great tool for installing Bioconductor packages in R.
Make sure to use the ? symbol to check the documentation for most R functions.
Fragments of sequences from RNA sequencing may be mapped to a reference genome and quantified.
The edgeR manual has many good examples of differential expression analysis on different data sets.
|
|
Break
|
|
|
DE Analysis with Generalized Linear Models
|
The BiocManager is is a great tool for installing Bioconductor packages in R.
Make sure to use the ? symbol to check the documentation for most R functions.
Fragments of sequences from RNA sequencing may be mapped to a reference genome and quantified.
The edgeR manual has many good examples of differential expression analysis on different data sets.
|
|
Supplemental - Introduction to Omics Data Analysis
|
Biostaticians apply statistical methods to the analysis of biological data sets.
Bioinformaticians use algorithms and computer programming to alayze omics data
There are a huge variety of omics technologies that generate data for bioinformatics analysis.
Scrpting pipelines can be used to automate complex bioinformatics analysis workflows.
|